How come nobody has mentioned Silent Debuggers yet? It's pretty much a sci-fi dungeon crawler in the most literal sense. Then again, being on the PC Engine probably doesn't help.
As for fantasy, I'd say it isn't just dungeon crawlers. Fantasy already had taken over in tabletop roleplaying games, that spread over all videogames that had some resemblance to roleplaying. By the point videogames started trying the idea the standard setting was already heavily established.